SPATA5

Inborn genetic errors affecting SPATA5 gene, which is encoded by the AFG2 AAA ATPase homolog A (AFG2A) gene, are associated with a rare neurogenetic illness known as Neurodevelopmental Disorder with Hearing loss, Seizures, and Brain abnormalities (NEDHSN, OMIM # 616577). This condition is alternatively referred to as “Epilepsy, Hearing Loss and Mental Retardation Syndrome” (EHLMRS). This disease is inherited via autosomal recessive trait, so compound heterozygous mutations are most frequently found as the causative genetic link. Pathogenic mutations may also disrupt a related gene SPATA5L1 (AFG2B), which encodes for an interacting partner of SPATA5 protein. More info

Deficiency in SPATA5 or SPATA5L1 is characterized by profound neurological dysfunction encompassing compromised cognitive advancement, epileptic episodes, microcephaly, atypical muscle tone, and sensorineural auditory impairment. The majority of individuals afflicted by this disorder are non-ambulatory, unable to maintain an independent sitting posture, and exhibit no progression in speech acquisition. Additional heterogeneous manifestations may include challenges with feeding, inadequate growth, cortical visual deficits, spasticity, scoliosis, immunodeficiency, and thrombocytopenia.

Pathogenic mechanism

Physiologically, SPATA5 and SPATA5L1 are involved in various cellular functions, which include protein turnover and DNA replication, among others. Regarding the latter, both proteins are components of the 55LCC heterohexameric ATPase complex that is associated with chromatin and enhances replisome proteostasis to support replication fork progression, thereby ensuring genome stability. Additionally, SPATA5 contains a putative mitochondrial targeting sequence, leading to a suggestion that it may be additionally involved in maintenance of mitochondrial function.

A diverse array of genetic alterations has been identified to compromise the AFG2A (SPATA5) and AFG2B (SPATA5L1) loci. Frameshift mutations and nonsense substitutions, both of which ultimately result in an early termination of the polypeptide chain, are likely to lead to reduced or diminished production of the SPATA5/SPATA5L1 protein. Furthermore, variants that interfere with accurate recognition of splice site junctions in a pre-mRNA transcript can trigger abnormal splicing patterns, similarly resulting in a cut-down of SPATA5/SPATA5L1 protein synthesis. Finally, pathogenic missense mutations have been shown to impair the function of SPATA5/SPATA5L1, as they can destabilize the structural integrity of the SPATA5/SPATA5L1 protein, hinder interactions with specific binding partners from the 55LCC complex or prevent proper substrate binding. The disease manifests in a compound heterozygous form, meaning that it occurs when a non-functional gene variant (referred to as a null variant) is paired with a poorly performing counterpart (known as a hypomorphic variant), or in case two hypomorphic alleles come together within a single individual.


Available Mouse Models

in development